




from .chunk_utils import chunk_layer
from .data_transforms import make_atomaa_masks
from .feats import atomaa_to_atomaa, frames_and_literature_positions_to_atomaa_pos, torsion_angles_to_frames
from .loss import compute_predicted_aligned_error, compute_tm
from .protein import Protein as OFProtein
from .protein import to_pdb
from .rigid_utils import Rigid, Rotation
from .tensor_utils import dict_multimap, flatten_final_dims, permute_final_dims





import os
from pathlib import Path
from typing import Dict, List

import fire
import torch

from transformers import AutoModelForSeqaSeqLM, AutoTokenizer
from transformers.utils.logging import get_logger


lowerCamelCase__				:     Optional[Any]			       =							get_logger(__name__)

def       UpperCAmelCase_							(   __UpperCAmelCase		:			str    ,    __UpperCAmelCase		:			str							)      ->				List[str]:
      if text.startswith(__UpperCAmelCase							):
            return text[len(__UpperCAmelCase							) :]
      return text  # or whatever

def       UpperCAmelCase_							(   __UpperCAmelCase		:			Union[str, Any]							)      ->				List[Any]:
      return {remove_prefix(__UpperCAmelCase    ,    'model.'							): v for k, v in sd.items()}

def       UpperCAmelCase_							(   __UpperCAmelCase		:			List[Dict[str, torch.Tensor]]							)      ->				Dict:
      SCREAMING_SNAKE_CASE_					=    {}
      for k in state_dicts[0].keys():
            SCREAMING_SNAKE_CASE_					=    [sd[k] for sd in state_dicts]
            SCREAMING_SNAKE_CASE_					=    sum(__UpperCAmelCase							) / len(__UpperCAmelCase							)
            assert isinstance(__UpperCAmelCase    ,    torch.Tensor							)
            SCREAMING_SNAKE_CASE_					=    new_t
      return new_sd

def       UpperCAmelCase_							(   __UpperCAmelCase		:			str    ,    __UpperCAmelCase		:			str    ,    __UpperCAmelCase		:			str							)      ->				None:
      SCREAMING_SNAKE_CASE_					=    AutoModelForSeqaSeqLM.from_pretrained(__UpperCAmelCase							)
      if os.path.isfile(__UpperCAmelCase							):
            SCREAMING_SNAKE_CASE_					=    [pl_ckpt_path]
      else:
            assert os.path.isdir(__UpperCAmelCase							)
            SCREAMING_SNAKE_CASE_					=    list(Path(__UpperCAmelCase							).glob('*.ckpt'							)							)
            assert ckpt_files, f"could not find any ckpt files inside the {pl_ckpt_path} directory"

      if len(__UpperCAmelCase							) > 1:
            logger.info(f"averaging the weights of {ckpt_files}"							)

      SCREAMING_SNAKE_CASE_					=    [sanitize(torch.load(__UpperCAmelCase    ,    map_location='cpu'							)['state_dict']							) for x in ckpt_files]
      SCREAMING_SNAKE_CASE_					=    average_state_dicts(__UpperCAmelCase							)

      SCREAMING_SNAKE_CASE_		,				SCREAMING_SNAKE_CASE_					=    hf_model.load_state_dict(__UpperCAmelCase    ,    strict=__UpperCAmelCase							)
      assert not missing, f"missing keys: {missing}"
      hf_model.save_pretrained(__UpperCAmelCase							)
      try:
            SCREAMING_SNAKE_CASE_					=    AutoTokenizer.from_pretrained(__UpperCAmelCase							)
            tok.save_pretrained(__UpperCAmelCase							)
      except Exception:
            pass
            # dont copy tokenizer if cant


if __name__ == "__main__":
   fire.Fire(convert_pl_to_hf)